SCIENTIFIC PAPERS

Rathnayake, I., Hargreaves, M., & Huygens, F. (2011a). Genotyping of Enterococcus faecalis and Enterococcus faecium
isolates by use of a set of eight single nucleotide polymorphisms. Journal of Clinical Microbiology, 49, 367-72.

Rathnayake, I., Hargreaves, M., & Huygens, F. (2011b). SNP diversity of Enterococcus faecalis and Enterococcus faecium in
a South East Queensland waterway, Australia, and associated antibiotic resistance gene profiles. BMC Microbiology, 11,
201.

Sheludchenko, M., Huygens, F., & Hargreaves, M. (2011). Human-specific E. coli single nucleotide polymorphism (SNP)
genotypes detected in a South East Queensland waterway, Australia. Environmental Science and Technology, 45,
10331-6.

Sheludchenko, M., Huygens, F., & Hargreaves, M. (2010). Highly discriminatory single-nucleotide polymorphism
interrogation of Escherichia coli by use of allele-specific real-time PCR and eBURST analysis. Applied and Environmental
Microbiology, 76, 4337-45.

Honsa, E., Fricke, R., Stephens, A., Ko, D., Kong, F., Gilbert, G., Huygens, F., Giffard, P. (2008). Assignment of Streptococcus
agalactiae isolates to aclonal complexes using a small set of single nucleotide polymorphisms. BMC Microbiology, 19(8),
140.

Huygens, F., Inman-Bamber, J. N., Munckhof, W., Schooneveldt, J., Harrison, B., McMahon, J., & Giffard, P. (2006).
Staphylococcus aureus genotyping using real-time PCR formats. Journal of Clinical Microbiology, 44, 3712-9.

Price, E., Thiruvenkataswamy, V., Mickan, L., Unicomb, L., Rios, R., Huygens, F., & Giffard, P. (2006). Genotyping of
Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaA short variable region
sequencing. Journal of Medical Microbiology, 55, 1061-70.

Stephens, A., Huygens, F., Inman-Bamber, J., Price, E. N., Schooneveldt, J., Munckhof, W., & Giffard, P. (2006). Methicillin-
resistant Staphylococcus aureus genotyping using a small set of polymorphisms. Journal of Medical Microbiology, 55,
43-51.

Robertson, G., Thiruvenkataswamy, V., Shilling, H., Price, E., Huygens, F. H., & Giffard, P. (2004). Identification and
interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence
typing databases. Journal of Medical Microbiology, 53, 35-45.